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Cleanup: sort globalVariables alphabetically in R/zzz.R #1413

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Cleanup: sort globalVariables alphabetically in R/zzz.R #1413

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b6bc86c
fix:orded variables alphabetically. Lintr and spelling checks passed.
Jul 27, 2026
e741db3
Merge branch 'main' into 1369-cleanup/sort-globalvariables-alphabetic…
Shaakon35 Aug 4, 2026
e9b2266
Indentation and uppercase before lower case issues fixed
Aug 4, 2026
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391 changes: 194 additions & 197 deletions R/zzz.R
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Original file line number Diff line number Diff line change
@@ -1,200 +1,197 @@
.onLoad <- function(libname, pkgname) {
utils::globalVariables(c(
".",
".dose_time",
".facet_label_values",
".facet_n",
".pp_excl",
".pp_excl_reason",
".ROWID",
"facet_label",
":=",
"ADOSEDUR",
"AFRLT",
"ARRLT",
"ATPT",
"ATPTN",
"ATPTREF",
"AVAL",
"AVALC",
"AVALU",
"CI_lower",
"CI_upper",
"Core",
"Count.missing",
"Count.total",
"Dataset",
"Depends",
"DOSEA",
"DOSETRT",
"DOSNOA",
"DTYPE",
"EPOCH",
"EVID",
"EXFAST",
"FEDSTATE",
"Geocv",
"Geomean",
"INT_ROWID",
"IX",
"Label",
"LAMZ",
"LAMZIX",
"LAMZLL",
"LAMZNPT",
"Max",
"Mean",
"Median",
"Min",
"ModeConv_factor",
"ModeUnit",
"N",
"NFRLT",
"NRRLT",
"Order",
"PARAM",
"PARAMCD",
"PCFAST",
"PCRFTDTM",
"PCSPEC",
"PCTESTCD",
"PCTPT",
"PCTPTNUM",
"PCTPTREF",
"PKNCA",
"PKSUM1F",
"PKSUM1FN",
"PKSUM1RS",
"PPANMETH",
"PPORRES",
"PPORRESU",
"PPORRESU_factor",
"PPORRESU_ref",
"PPORRES_ref",
"PPREASND",
"PPSTRES",
"PPSTRESC",
"PPSTRESN",
"PPSTRESU",
"PPSTRESU_factor",
"PPSTRESU_ref",
"PPSTRES_log",
"PPSTRES_ref",
"PPTEST",
"PPTESTCD",
"PPTESTCD_cdisc",
"PPTESTCD_cdisc_raw",
"PPTESTCD_ref",
"PPTESTCD_unit",
"PPSUMFL",
"PPSUMRSN",
"RANGE",
"REASON",
"ROWID",
"Ratio",
"Ratio_Type",
"SD",
"SD_max",
"SD_min",
"SE",
"STUDYID",
"Spec1_Label",
"Spec1_Units",
"Spec1_Value",
"Spec2_Label",
"Spec2_Units",
"Spec2_Value",
"TIME_DOSE",
"TRTRINT",
"TYPE",
"Type",
"USUBJID",
"USUBJID_COUNT",
"VOLUME",
"Value",
"Variable",
"adj.r.squared",
"aucs",

"calculate_ratio_app",
"color",
"color_var",
"combn",
"conv_factor",
"conversion_factor",
"data",
"digits",
"dose",

"dose_time",
"end",
"end_auc",
"end_dose",
"exclude",
"exclude_half.life",
"facet_title",
"format_fun",
"ggplotly",
"group_var",
"half.life",
"id_list",
"id_plot",
"impute",
"imported_PPSTRESU",
"include_half.life",
"install.packages",
"interval_name",
"interval_name_col",
"interval_next",
"interval_prev",
"is.excluded.hl",
"is.included.hl",
"is.iv",
"is_blq",
"is_extravascular",
"is_halflife_used",
"is_metabolite",
"is_missing",
"is_one_dose",
"is_requested",
"lambda.z",
"lambda.z.time.first",
"lambda.z.time.last",
"layout",
"legend_group",
"line_type_label",
"metadata_nca_parameters",
"metadata_nca_variables",
"missing_tau",
"n_blq",
"n_blq_ratio",
"n_samples",
"next_dose_time",
"next_dosno",
"next_nom_dose_time",
"nom_dose_time",
"nom_interval_next",
"nom_interval_prev",
"parameter",
"pknca_units_tbl",
"ppanmeth_ref_groups",
"ppanmeth_test_groups",
"predict",
"prev_dosno",
"se",
"single_dose_present",
"span.ratio",
"start",
"start_auc",
"start_dose",
"strata_cols_comb",
"time",
"tlast",
"tooltip_text",
"type",
"type_interval",
"var_name",
"view",
"zero_str"
))
".",

@Gero1999 Gero1999 Jul 27, 2026

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hello @tieganhulbert! I can see this was accidentally re-identedd identation was addedd by accident. You can do shift+tab to solve it

".dose_time",
".facet_label_values",
".facet_n",
".pp_excl",
".pp_excl_reason",
".ROWID",
":=",
"adj.r.squared",
"ADOSEDUR",
"AFRLT",
"ARRLT",
"ATPT",
"ATPTN",
"ATPTREF",
"aucs",
"AVAL",
"AVALC",
"AVALU",
"calculate_ratio_app",
"CI_lower",
"CI_upper",
"color",
"color_var",
"combn",
"conv_factor",
"conversion_factor",
"Core",
"Count.missing",
"Count.total",
"data",
"Dataset",
"Depends",
"digits",
"dose",
"dose_time",
"DOSEA",
"DOSETRT",
"DOSNOA",
"DTYPE",
"end",
"end_auc",
"end_dose",
"EPOCH",
"EVID",
"exclude",
"exclude_half.life",
"EXFAST",
"facet_label",
"facet_title",
"FEDSTATE",
"format_fun",
"Geocv",
"Geomean",
"ggplotly",
"group_var",
"half.life",
"id_list",
"id_plot",
"imported_PPSTRESU",
"impute",
"include_half.life",
"install.packages",
"INT_ROWID",
"interval_name",
"interval_name_col",
"interval_next",
"interval_prev",
"is.excluded.hl",
"is.included.hl",
"is.iv",
"is_blq",
"is_extravascular",
"is_halflife_used",
"is_metabolite",
"is_missing",
"is_one_dose",
"is_requested",
"IX",
"Label",
"lambda.z",
"lambda.z.time.first",
"lambda.z.time.last",
"LAMZ",
"LAMZIX",
"LAMZLL",
"LAMZNPT",
"layout",
"legend_group",
"line_type_label",
"Max",
"Mean",
"Median",
"metadata_nca_parameters",
"metadata_nca_variables",
"Min",
"missing_tau",
"ModeConv_factor",
"ModeUnit",
"N",
"n_blq",
"n_blq_ratio",
"n_samples",
"next_dose_time",
"next_dosno",
"next_nom_dose_time",
"NFRLT",
"nom_dose_time",
"nom_interval_next",
"nom_interval_prev",
"NRRLT",
"Order",
"PARAM",
"PARAMCD",
"parameter",
"PCFAST",
"PCRFTDTM",
"PCSPEC",
"PCTESTCD",
"PCTPT",
"PCTPTNUM",
"PCTPTREF",
"PKNCA",
"pknca_units_tbl",
"PKSUM1F",
"PKSUM1FN",
"PKSUM1RS",
"PPANMETH",
"ppanmeth_ref_groups",
"ppanmeth_test_groups",
"PPORRES",
"PPORRES_ref",
"PPORRESU",
"PPORRESU_factor",
"PPORRESU_ref",
"PPREASND",
"PPSTRES",
"PPSTRES_log",
"PPSTRES_ref",
"PPSTRESC",
"PPSTRESN",
"PPSTRESU",
"PPSTRESU_factor",
"PPSTRESU_ref",
"PPSUMFL",
"PPSUMRSN",
"PPTEST",
"PPTESTCD",
"PPTESTCD_cdisc",
"PPTESTCD_cdisc_raw",
"PPTESTCD_ref",
"PPTESTCD_unit",
"predict",
"prev_dosno",
"RANGE",
"Ratio",
"Ratio_Type",
"REASON",
"ROWID",
"SD",
"SD_max",
"SD_min",
"se",
"SE",

@Gero1999 Gero1999 Jul 27, 2026

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uppercase before lowercase

Suggested change
"se",
"SE",
"SE",
"se",

"single_dose_present",
"span.ratio",
"Spec1_Label",
"Spec1_Units",
"Spec1_Value",
"Spec2_Label",
"Spec2_Units",
"Spec2_Value",
"start",
"start_auc",
"start_dose",
"strata_cols_comb",
"STUDYID",
"time",
"TIME_DOSE",
"tlast",
"tooltip_text",
"TRTRINT",
"type",
"Type",
"TYPE",

@Gero1999 Gero1999 Jul 27, 2026

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uppercase before lowercase

Suggested change
"type",
"Type",
"TYPE",
"TYPE",
"Type",
"type",

"type_interval",
"USUBJID",
"USUBJID_COUNT",
"Value",
"var_name",
"Variable",
"view",
"VOLUME",
"zero_str"))
}
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