Bump langevin solver to 1.4.7#1711
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Picks up the fix for the NullPointerException when a bound site transitions to a state with no defined binding reaction (cam-center/LangevinNoVis01#36, release 1.4.7). vcell-core downloads the per-platform binaries from the GitHub release using these version properties, and Dockerfile-batch-dev COPYs the downloaded linux binary into the vcell-batch image. Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
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Updates the Langevin (SpringSaLaD) solver from 1.4.6 → 1.4.7.
What 1.4.7 fixes
Release 1.4.7 fixes a
NullPointerExceptionthat crashed the solver when a bound site transitioned to a(state, partner-state)signature with no associated binding reaction (cam-center/LangevinNoVis01#36). The bond now retains its existing reaction identity/length and stops spontaneously dissociating in that state (off-rate0.0) instead of crashing.Change
Bumps the three solver version properties in
pom.xml:solvers-langevin-mac.versionsolvers-langevin-windows.versionsolvers-langevin-linux.versionHow this propagates
vcell-core/pom.xmldownloads the per-platform binaries from the GitHub release using these properties (langevin-windows-latest,langevin-macos-universal,langevin-ubuntu-latest) intolocalsolvers/.docker/build/Dockerfile-batch-devCOPYs the downloadedlocalsolvers/linux64/langevin_x64into the vcell-batch image (and onward to the singularity image) — no Dockerfile change required.Per request,
vcell-fluxcdis intentionally not changed in this PR.🤖 Generated with Claude Code