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1. haystackfm haystackfm Public

   A GPU-accelerated FM-index library for DNA sequence alignment. Runs on native targets via wgpu and compiles to WebAssembly for in-browser WebGPU use.

   Rust

2. phylo-rs phylo-rs Public

   A Rust-based library for phylogenetic analysis and manipulation

   Rust 22 6

3. premise premise Public

   PREMISE: A probabilistic framework for source assignment of Illumina reads

   Rust 1 2

4. near-linear-cophenetic-distance near-linear-cophenetic-distance Public

   Calculating generalized Cophenetic Distances in near-linear time under any Lp norm.

   Rust 1

5. claude-science-hackathon claude-science-hackathon Public

   Causal and interpretable modeling of influenza antigenic distance: separates causal HA escape drivers from linked hitchhikers and predicts antigenic distance with a B-spline Kolmogorov-Arnold Network

   HTML

6. volstream volstream Public

   Rust 1 1