Report Beam Lineage from Parquet reads #5850
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| /* | ||
| * Copyright 2026 Spotify AB. | ||
| * | ||
| * Licensed under the Apache License, Version 2.0 (the "License"); | ||
| * you may not use this file except in compliance with the License. | ||
| * You may obtain a copy of the License at | ||
| * | ||
| * http://www.apache.org/licenses/LICENSE-2.0 | ||
| * | ||
| * Unless required by applicable law or agreed to in writing, | ||
| * software distributed under the License is distributed on an | ||
| * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY | ||
| * KIND, either express or implied. See the License for the | ||
| * specific language governing permissions and limitations | ||
| * under the License. | ||
| */ | ||
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| package com.spotify.scio.parquet | ||
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| import com.spotify.scio.ScioContext | ||
| import com.spotify.scio.coders.{Coder, CoderMaterializer} | ||
| import com.spotify.scio.util.ScioUtil | ||
| import com.spotify.scio.values.SCollection | ||
| import com.twitter.chill.ClosureCleaner | ||
| import org.apache.beam.sdk.io.FileSystems | ||
| import org.apache.beam.sdk.io.hadoop.format.HadoopFormatIO | ||
| import org.apache.beam.sdk.transforms.DoFn.{ProcessElement, Setup} | ||
| import org.apache.beam.sdk.transforms.{DoFn, SimpleFunction} | ||
| import org.apache.beam.sdk.values.TypeDescriptor | ||
| import org.apache.hadoop.conf.Configuration | ||
| import org.slf4j.LoggerFactory | ||
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| import scala.reflect.ClassTag | ||
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| private[parquet] object HadoopParquet { | ||
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| /** Read data from Hadoop format using HadoopFormatIO. */ | ||
| def readHadoopFormatIO[A: ClassTag, T: ClassTag]( | ||
| sc: ScioContext, | ||
| conf: Configuration, | ||
| projectionFn: Option[A => T], | ||
| skipValueClone: Option[Boolean] | ||
| )(implicit coder: Coder[T]): SCollection[T] = { | ||
| val inputType = ScioUtil.classOf[A] | ||
| val outputType = ScioUtil.classOf[T] | ||
| val bcoder = CoderMaterializer.beam(sc, Coder[T]) | ||
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| val hadoop = HadoopFormatIO | ||
| .read[java.lang.Boolean, T]() | ||
| // Hadoop input always emit key-value, and `Void` causes NPE in Beam coder | ||
| .withKeyTranslation(new SimpleFunction[Void, java.lang.Boolean]() { | ||
| override def apply(input: Void): java.lang.Boolean = true | ||
| }) | ||
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| val withSkipClone = skipValueClone.fold(hadoop)(skip => hadoop.withSkipValueClone(skip)) | ||
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| val withValueTranslation = projectionFn.fold { | ||
| withSkipClone.withValueTranslation( | ||
| new SimpleFunction[T, T]() { | ||
| override def apply(input: T): T = input | ||
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| override def getInputTypeDescriptor: TypeDescriptor[T] = TypeDescriptor.of(outputType) | ||
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| override def getOutputTypeDescriptor = TypeDescriptor.of(outputType) | ||
| }, | ||
| bcoder | ||
| ) | ||
| } { fn => | ||
| val g = ClosureCleaner.clean(fn) // defeat closure | ||
| withSkipClone.withValueTranslation( | ||
| new SimpleFunction[A, T]() { | ||
| // Workaround for incomplete Avro objects | ||
| // `SCollection#map` might throw NPE on incomplete Avro objects when the runner tries | ||
| // to serialized them. Lifting the mapping function here fixes the problem. | ||
| override def apply(input: A): T = g(input) | ||
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| override def getInputTypeDescriptor = TypeDescriptor.of(inputType) | ||
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| override def getOutputTypeDescriptor = TypeDescriptor.of(outputType) | ||
| }, | ||
| bcoder | ||
| ) | ||
| } | ||
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| sc.applyTransform(withValueTranslation.withConfiguration(conf)).map(_.getValue) | ||
| } | ||
| } | ||
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| /** | ||
| * DoFn that reports directory-level source lineage for legacy Parquet reads. | ||
| * | ||
| * @param filePattern | ||
| * The file pattern or path to report lineage for | ||
| */ | ||
| private[parquet] class LineageReportDoFn[T](filePattern: String) extends DoFn[T, T] { | ||
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| @transient | ||
| private lazy val logger = LoggerFactory.getLogger(this.getClass) | ||
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| @Setup | ||
| def setup(): Unit = { | ||
| try { | ||
| val isDirectory = filePattern.endsWith("/") | ||
| val resourceId = FileSystems.matchNewResource(filePattern, isDirectory) | ||
| val directory = resourceId.getCurrentDirectory | ||
| FileSystems.reportSourceLineage(directory) | ||
| } catch { | ||
| case e: Exception => | ||
| logger.warn( | ||
| s"Error when reporting lineage for pattern: $filePattern", | ||
| e | ||
| ) | ||
| } | ||
| } | ||
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| @ProcessElement | ||
| def processElement(@DoFn.Element element: T, out: DoFn.OutputReceiver[T]): Unit = | ||
| out.output(element) | ||
| } | ||
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This is just to reduce duplication or is there a functional change here?
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just to reduce, no new functionality, except I noticed that in some cases Scio's derived coder was not set to HadoopFormatIO transformation. Probably Beam auto-derives the same coder, but anyway it is better to set explicitly