Repository for manuscript "Accurate prediction of site- and amino-acid substitution rates with a mutation-selection model"

scripts: contains scripts used to create the data in a the manusscript

data: contains sequence data used for the analysis

RosettaEvolve sequences can be found in the repository for the article "Improved prediction of site-specific evolutionary rates from structure by averaging across homologs", https://github.com/Andre-lab/site-rate-averaging.git.