Hello,
Sorry to bring up this issue again. I know it was already discussed here neherlab/pan-genome-analysis#12, however, I still can't seem to get it to work.
I did everything as suggested:
- Transferring my files with the link-to-server.py script
- Creating routes and view via
bash add-new-pages-repo.sh my-species
- Is the panX output in
pan-genome-visulation/public/dataset? - Yes
- Is a
.js file corresponding to your species in routes?- Yes
- Is a
.jade file corresponding to your species in views? - Yes
Then I ran npm start and I got the following:

I copied the link (with my species name appended to it) http://localhost:8000/my_species and ran it on the browser but couldn't get tot he interactive display. It gave me the "Error: localsite cannot be reached" message.
I tried changing the localhost from 8000 to 3000 and repeated everything but that didn't work either. Is there something I'm missing. I really hope you can help.
Thank you
Hello,
Sorry to bring up this issue again. I know it was already discussed here neherlab/pan-genome-analysis#12, however, I still can't seem to get it to work.
I did everything as suggested:
bash add-new-pages-repo.sh my-speciespan-genome-visulation/public/dataset? - Yes.jsfile corresponding to your species inroutes?- Yes.jadefile corresponding to your species inviews? - YesThen I ran

npm startand I got the following:I copied the link (with my species name appended to it) http://localhost:8000/my_species and ran it on the browser but couldn't get tot he interactive display. It gave me the "Error: localsite cannot be reached" message.
I tried changing the localhost from 8000 to 3000 and repeated everything but that didn't work either. Is there something I'm missing. I really hope you can help.
Thank you