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walk_through_session.py
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39 lines (29 loc) · 1.24 KB
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import logging
import os
from aind_behavior_dynamic_foraging.data_contract import dataset as df_foraging_dataset
from aind_behavior_dynamic_foraging.task_logic.trial_generators import (
CoupledTrialGeneratorSpec,
)
from aind_behavior_dynamic_foraging.task_logic.trial_models import TrialOutcome
logging.basicConfig(
level=logging.DEBUG,
)
logger = logging.getLogger(__name__)
def walk_through_session(data_directory: os.PathLike):
dataset = df_foraging_dataset(data_directory)
software_events = dataset["Behavior"]["SoftwareEvents"]
software_events.load_all()
trial_outcomes = software_events["TrialOutcome"].data["data"].iloc
trial_generator = CoupledTrialGeneratorSpec().create_generator()
for i, outcome in enumerate(trial_outcomes):
trial_generator.update(TrialOutcome.model_validate(outcome))
trial = trial_generator.next()
if not trial:
print(f"Session finished at trial {i}")
return
if __name__ == "__main__":
import argparse
parser = argparse.ArgumentParser(description="Walk through a behavior session.")
parser.add_argument("--data-directory", help="Path to the session directory")
args = parser.parse_args()
walk_through_session(args.data_directory)